The Epigenetics Revolution (48 page)

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Authors: Nessa Carey

Tags: #Science/Life Sciences/Genetics and Genomics

BOOK: The Epigenetics Revolution
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26
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Nature
439: 871–874.
27
. Schlesinger et al. (2007),
Nature Genetics
39: 232–236.
28
. Shi et al. (2004),
Cell
29: 119; 941–53.
29
. Ooi et al. (2007),
Nature
448: 714–717.
30
. Bachmann et al. (2006),
J Clin Oncology
24: 268–273.
31
. Lim et al. (2010),
Carcinogenesis
31: 512–20.
32
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Nature Genetics
40: 741–750.
33
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Nature Genetics
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34
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35
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Cell
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36
. Ohm et al. (2007),
Nature Genetics
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37
. Fabbri et al. (2007),
Proc Natl Acad Sci. USA
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Chapter 12
1
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Dev Psychobiol.
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2
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Dev Psychopathol.
13: 733–53.
3
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JAMA
284: 592–7.
4
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Am J Psychiatry
162: 995–997.
5
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Neuropsychopharm.
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6
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Nature Neuroscience
7: 847–854.
7
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Nature Neuroscience
12: 1559–1565.
8
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Mol Cell
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9
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Nature Neuroscience
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11
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Neuron
69: 359–372.
12
. Uchida et al. (2011),
Neuron
69: 359–372.
13
. Elliott et al. (2010),
Nature Neuroscience
13: 1351–1353.
14
. Uchida et al. (2011),
Neuron
69: 359–372.
15
. For a useful review of animal models of depression, see Nestler and Hyman (2010),
Nature Neuroscience
13: 1161–1169.
16
. Uchida et al. (2011),
Neuron
69: 359–372.
17
. Weaver et al. (2004),
Nature Neuroscience
7: 847–854.
18
. See, for example, interviews in Buchen (2010),
Nature
467: 146–148.
19
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Nature
403: 501–502.
20
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Science
324: 30–5.
21
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PLoS One
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22
. For a useful review of DNA methylation and memory formation, see Day and Sweatt (2010),
Nature Neuroscience
13: 1319–1329.
23
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Neuron
42: 961–972.
24
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Neuron
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25
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Dev Dyn.
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26
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Nature
459: 55–60.
27
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447: 178–182.
28
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Nature Neuroscience
13: 1120–1127.
29
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Nature Neuroscience
13: 1128–1136.
30
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Nature
469: 534–538.
Chapter 13
2
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Physiological Reviews
88: 557–579.
3
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EMBO Reports
11: 735–737.
4
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Journal of the American Medical Association
299: 2877–2883.
5
.   Gaudet et al. (2003),
Science
300: 488–492.
6
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Science
300: 455.
7
.   For a useful review of changes in epigenetic modifications during ageing, see Calvanese et al. (2009),
Ageing Research Reviews
8: 269–276.
8
.   Kennedy et al. (1995),
Cell
80: 485–496.
9
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Genes and Development
13: 2570–2580.
10
. Dang et al. (2009),
Nature
459: 802–807.
11
. Tissenbaum and Guarente (2001),
Nature
410: 227–230.
12
. Rogina and Helfand (2004),
Proceedings of the National Academy of Sciences USA
101: 15998–16003.
13
. Michishita et al. (2008),
Nature
452: 492–496.
14
. Kawahara et al. (2009),
Cell
136: 62–74.
16
. Michishita et al. (2008),
Nature
452: 492–496.
17
. McCay et al. (1935),
Nutrition
5: 155–71.
18
. Reviewed in Kaeberlein and Powers (2007),
Ageing Research Reviews
6: 128–140.
19
. Partridge et al. (2010),
EMBO Reports
11: 735–737.
20
. Howitz et al. (2003),
Nature
425: 191–196.
21
. Wood et al. (2004),
Nature
430: 686–689.
22
. Baur et al. (2006),
Nature
444: 337–342.
23
. Howitz et al. (2003),
Nature
425: 191–196.
24
. Beher et al. (2009),
Chem Biol Drug Des.
74: 619–24.
25
. Pacholec et al. (2010),
J Biol Chem.
285: 8340–51.
26
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Chem Soc Rev.
39: 435–54.
Chapter 14
1
.   McCay et al. (1935),
Nutrition
5: 155–71.
2
.   For a useful review of the differences, see Chittka and Chittka (2010),
PLoS Biology
8: e1000532.
3
.   For a useful summary of these processes, see Maleszka (2008),
Epigenetics
3: 188–192.
4
.   Honeybee Genome Sequencing Consortium (2006),
Nature
443: 931–49.
5
.   Wang et al. (2006),
Science
314: 645–647.
6
.   Kucharski et al. (2008),
Science
319: 1827–1830.
7
.   Lyko et al. (2010),
PLos Biol.
8: e1000506.
8
.   Spannhoff et al. (2011),
EMBO Reports
12: 238–243.
9
.   Lockett et al. (2010),
NeuroReport
21: 812–816.
10
. Hunt et al. (2010),
Genome Biol Evol
2: 719–728.
11
. Lyko et al. (2010),
PLos Biol.
8: e1000506.
12
. Bonasio et al. (2010),
Science
329: 1068–1071
13
. Izuta et al. (2009),
Evid Based Complement Alternat Med.
6: 489–94.
Chapter 15
1
.   For a useful review, see Dennis and Peacock (2009),
J Biol
8: article 57.
2
.   For a useful summary of the epigenetic control of vernalisation, see Ahmad et al. (2010),
Molecular Plant
4: 719–728.
3
.   Pien et al. (2008),
Plant Cell
20: 580–588.
4
.   Sung and Amasino (2004),
Nature
427: 159–164.
5
.   De Lucia et al. (2008),
Proc Natl Acad Sci. USA
105: 16831–16836.
6
.   Heo and Sung (2011),
Science
331: 76–79.
7
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Plant J
53: 731–738.
8
.   Palauqui et al. (1997),
EMBO J
16: 4738–4745
9
.   See, for example, Schubert et al. (2006),
EMBO J
25: 4638–4649.
10
. Gehring et al. (2009),
Science
324: 1447–1451.
11
. Hsieh et al. (2009),
Science
324: 1451–1454
12
. Mosher et al. (2009),
Nature
460: 283–286.
13
. Slotkin et al. (2009),
Cell
136: 461–472.
14
. Garnier et al. (2008),
Epigenetics
3: 14–20.
15
. Reviewed in Zhang et al. (2010),
J Genet and Genomics
37: 1–12.
16
. Chan et al. (2005),
Nature Reviews Genetics
6: 351–360.
17
. Cokus et al. (2008),
Nature
452: 215–219.
Chapter 16
1
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Sex Dev.
4: 110–8.
2
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Fertil Steril.
81: 954–64.
3
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Nature
171: 737–738.
4
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Genetics
57: 231–246.
5
.   For further information, see
http://www.sienabiotech.com
.
6
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Nat Biotechnol.
28: 1259–66.
7
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8
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Hum Mol Genet.
15: 705–16.
9
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Ageing Research Reviews
8: 268–276.
10
. Reviewed in Guilloteau et al. (2010),
Res Rev.
23: 366–84.
11
. Palsdottir et al. (2008),
PLoS Genet.
June 20, 4: e1000099.
12
. Abstract from Palsdottir et al. (2010),
Wellcome Trust Conference on Signalling to Chromatin Hinxton UK
13
. See for example Okabe et al. (1995),
Biol PharmBull.
18: 1665–70.
14
. Nakahata et al. (2008),
Cell
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15
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17: 1414–21.
16
. Gregoretti et al. (2004),
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338: 17–31.

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